Cancer-miRNA Regulatory Network

Compendium of miRNA Target Genes

Download FIRM

Citation

Genes Targeted by hsa-mir-200c in B-CLL Leukemia Haslinger Cluster 21 Table contains all genes in the B-CLL Leukemia Haslinger cluster number 21. If a gene harbors a predicted miRNA binding site by one of the three inference methods it is displayed in the final column: M = Weeder-miRvestigator predicted site, P = PITA predicted site and T = TargetScan predicted site. Entrez ID Symbol Description hsa-mir-200c 64112 MOAP1 modulator of apoptosis 1 [Source:HGNC Symbol;Acc:16658] zzz999 4548 MTR 5-methyltetrahydrofolate-homocysteine methyltransferase [Source:HGNC Symbol;Acc:7468] zzz999 9184 BUB3 budding uninhibited by benzimidazoles 3 homolog (yeast) [Source:HGNC Symbol;Acc:1151] zzz999 23279 NUP160 nucleoporin 160kDa [Source:HGNC Symbol;Acc:18017] zzz999 27250 PDCD4 programmed cell death 4 (neoplastic transformation inhibitor) [Source:HGNC Symbol;Acc:8763] P 64844 MARCH7 membrane-associated ring finger (C3HC4) 7 [Source:HGNC Symbol;Acc:17393] zzz999 23376 KIAA0776 KIAA0776 [Source:HGNC Symbol;Acc:23039] zzz999 23390 ZDHHC17 zinc finger, DHHC-type containing 17 [Source:HGNC Symbol;Acc:18412] P 25956 SEC31B SEC31 homolog B (S. cerevisiae) [Source:HGNC Symbol;Acc:23197] zzz999 387680 FAM21A family with sequence similarity 21, member A [Source:HGNC Symbol;Acc:23416] zzz999 5980 REV3L REV3-like, catalytic subunit of DNA polymerase zeta (yeast) [Source:HGNC Symbol;Acc:9968] zzz999 8034 SLC25A16 solute carrier family 25 (mitochondrial carrier; Graves disease autoantigen), member 16 [Source:HGNC Symbol;Acc:10986] zzz999 5885 RAD21 RAD21 homolog (S. pombe) [Source:HGNC Symbol;Acc:9811] zzz999 23433 RHOQ ras homolog gene family, member Q [Source:HGNC Symbol;Acc:17736] zzz999 22890 ZBTB1 zinc finger and BTB domain containing 1 [Source:HGNC Symbol;Acc:20259] zzz999 3843 IPO5 importin 5 [Source:HGNC Symbol;Acc:6402] zzz999 9646 CTR9 Ctr9, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:16850] zzz999 23231 SEL1L3 sel-1 suppressor of lin-12-like 3 (C. elegans) [Source:HGNC Symbol;Acc:29108] zzz999 23389 MED13L mediator complex subunit 13-like [Source:HGNC Symbol;Acc:22962] zzz999 9675 TTI1 Tel2 interacting protein 1 homolog (S. pombe) [Source:HGNC Symbol;Acc:29029] zzz999 57711 ZNF529 zinc finger protein 529 [Source:HGNC Symbol;Acc:29328] zzz999 9255 AIMP1 aminoacyl tRNA synthetase complex-interacting multifunctional protein 1 [Source:HGNC Symbol;Acc:10648] zzz999 11231 SEC63 SEC63 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:21082] zzz999 51031 GLOD4 glyoxalase domain containing 4 [Source:HGNC Symbol;Acc:14111] zzz999 648 BMI1 BMI1 polycomb ring finger oncogene [Source:HGNC Symbol;Acc:1066] P 4140 MARK3 MAP/microtubule affinity-regulating kinase 3 [Source:HGNC Symbol;Acc:6897] zzz999 11129 CLASRP CLK4-associating serine/arginine rich protein [Source:HGNC Symbol;Acc:17731] zzz999 26009 ZZZ3 zinc finger, ZZ-type containing 3 [Source:HGNC Symbol;Acc:24523] zzz999 3188 HNRNPH2 heterogeneous nuclear ribonucleoprotein H2 (H') [Source:HGNC Symbol;Acc:5042] P 23013 SPEN spen homolog, transcriptional regulator (Drosophila) [Source:HGNC Symbol;Acc:17575] zzz999 6856 SYPL1 synaptophysin-like 1 [Source:HGNC Symbol;Acc:11507] zzz999 167227 DCP2 DCP2 decapping enzyme homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:24452] P 3192 HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) [Source:HGNC Symbol;Acc:5048] P 23262 PPIP5K2 diphosphoinositol pentakisphosphate kinase 2 [Source:HGNC Symbol;Acc:29035] zzz999 9208 LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 [Source:HGNC Symbol;Acc:6702] zzz999 4552 MTRR 5-methyltetrahydrofolate-homocysteine methyltransferase reductase [Source:HGNC Symbol;Acc:7473] zzz999 2332 FMR1 fragile X mental retardation 1 [Source:HGNC Symbol;Acc:3775] P 7764 ZNF217 zinc finger protein 217 [Source:HGNC Symbol;Acc:13009] P 23204 ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 [Source:HGNC Symbol;Acc:697] zzz999 23405 DICER1 dicer 1, ribonuclease type III [Source:HGNC Symbol;Acc:17098] zzz999 6430 SRSF5 serine/arginine-rich splicing factor 5 [Source:HGNC Symbol;Acc:10787] zzz999 6908 TBP TATA box binding protein [Source:HGNC Symbol;Acc:11588] P 64131 XYLT1 xylosyltransferase I [Source:HGNC Symbol;Acc:15516] zzz999 7398 USP1 ubiquitin specific peptidase 1 [Source:HGNC Symbol;Acc:12607] zzz999 8763 CD164 CD164 molecule, sialomucin [Source:HGNC Symbol;Acc:1632] zzz999 3621 ING1 inhibitor of growth family, member 1 [Source:HGNC Symbol;Acc:6062] zzz999 9859 CEP170 centrosomal protein 170kDa [Source:HGNC Symbol;Acc:28920] zzz999 6427 SRSF2 serine/arginine-rich splicing factor 2 [Source:HGNC Symbol;Acc:10783] P 9805 SCRN1 secernin 1 [Source:HGNC Symbol;Acc:22192] zzz999 829 CAPZA1 capping protein (actin filament) muscle Z-line, alpha 1 [Source:HGNC Symbol;Acc:1488] zzz999 8841 HDAC3 histone deacetylase 3 [Source:HGNC Symbol;Acc:4854] zzz999 23332 CLASP1 cytoplasmic linker associated protein 1 [Source:HGNC Symbol;Acc:17088] P 36 ACADSB acyl-CoA dehydrogenase, short/branched chain [Source:HGNC Symbol;Acc:91] zzz999 29966 STRN3 striatin, calmodulin binding protein 3 [Source:HGNC Symbol;Acc:15720] P 23033 DOPEY1 dopey family member 1 [Source:HGNC Symbol;Acc:21194] zzz999 8505 PARG poly (ADP-ribose) glycohydrolase [Source:HGNC Symbol;Acc:8605] zzz999 55623 THUMPD1 THUMP domain containing 1 [Source:HGNC Symbol;Acc:23807] zzz999 819 CAMLG calcium modulating ligand [Source:HGNC Symbol;Acc:1471] zzz999 2976 GTF3C2 general transcription factor IIIC, polypeptide 2, beta 110kDa [Source:HGNC Symbol;Acc:4665] zzz999 9425 CDYL chromodomain protein, Y-like [Source:HGNC Symbol;Acc:1811] P 4644 MYO5A myosin VA (heavy chain 12, myoxin) [Source:HGNC Symbol;Acc:7602] zzz999 8087 FXR1 fragile X mental retardation, autosomal homolog 1 [Source:HGNC Symbol;Acc:4023] P 1387 CREBBP CREB binding protein [Source:HGNC Symbol;Acc:2348] P 9375 TM9SF2 transmembrane 9 superfamily member 2 [Source:HGNC Symbol;Acc:11865] zzz999 8939 FUBP3 far upstream element (FUSE) binding protein 3 [Source:HGNC Symbol;Acc:4005] P 5591 PRKDC protein kinase, DNA-activated, catalytic polypeptide [Source:HGNC Symbol;Acc:9413] zzz999 3587 IL10RA interleukin 10 receptor, alpha [Source:HGNC Symbol;Acc:5964] zzz999 5529 PPP2R5E protein phosphatase 2, regulatory subunit B', epsilon isoform [Source:HGNC Symbol;Acc:9313] P 55680 RUFY2 RUN and FYVE domain containing 2 [Source:HGNC Symbol;Acc:19761] P 91298 C12orf29 chromosome 12 open reading frame 29 [Source:HGNC Symbol;Acc:25322] zzz999 687 KLF9 Kruppel-like factor 9 [Source:HGNC Symbol;Acc:1123] P 22838 RNF44 ring finger protein 44 [Source:HGNC Symbol;Acc:19180] zzz999 10236 HNRNPR heterogeneous nuclear ribonucleoprotein R [Source:HGNC Symbol;Acc:5047] zzz999 7458 EIF4H eukaryotic translation initiation factor 4H [Source:HGNC Symbol;Acc:12741] zzz999 7267 TTC3 tetratricopeptide repeat domain 3 [Source:HGNC Symbol;Acc:12393] zzz999 9652 TTC37 tetratricopeptide repeat domain 37 [Source:HGNC Symbol;Acc:23639] zzz999 9169 SCAF11 SR-related CTD-associated factor 11 [Source:HGNC Symbol;Acc:10784] P 11215 AKAP11 A kinase (PRKA) anchor protein 11 [Source:HGNC Symbol;Acc:369] zzz999 22990 PCNX pecanex homolog (Drosophila) [Source:HGNC Symbol;Acc:19740] P 10253 SPRY2 sprouty homolog 2 (Drosophila) [Source:HGNC Symbol;Acc:11270] zzz999 23063 WAPAL wings apart-like homolog (Drosophila) [Source:HGNC Symbol;Acc:23293] P 8723 SNX4 sorting nexin 4 [Source:HGNC Symbol;Acc:11175] zzz999 2764 GMFB glia maturation factor, beta [Source:HGNC Symbol;Acc:4373] P 23195 MDN1 MDN1, midasin homolog (yeast) [Source:HGNC Symbol;Acc:18302] zzz999 2060 EPS15 epidermal growth factor receptor pathway substrate 15 [Source:HGNC Symbol;Acc:3419] P 22908 SACM1L SAC1 suppressor of actin mutations 1-like (yeast) [Source:HGNC Symbol;Acc:17059] zzz999 51351 ZNF117 zinc finger protein 117 [Source:HGNC Symbol;Acc:12897] zzz999 10426 TUBGCP3 tubulin, gamma complex associated protein 3 [Source:HGNC Symbol;Acc:18598] zzz999 29978 UBQLN2 ubiquilin 2 [Source:HGNC Symbol;Acc:12509] zzz999 10565 ARFGEF1 ADP-ribosylation factor guanine nucleotide-exchange factor 1(brefeldin A-inhibited) [Source:HGNC Symbol;Acc:15772] zzz999 51592 TRIM33 tripartite motif containing 33 [Source:HGNC Symbol;Acc:16290] P 1964 EIF1AX eukaryotic translation initiation factor 1A, X-linked [Source:HGNC Symbol;Acc:3250] P 8301 PICALM phosphatidylinositol binding clathrin assembly protein [Source:HGNC Symbol;Acc:15514] zzz999 81688 C6orf62 chromosome 6 open reading frame 62 [Source:HGNC Symbol;Acc:20998] P 9839 ZEB2 zinc finger E-box binding homeobox 2 [Source:HGNC Symbol;Acc:14881] P 6102 RP2 retinitis pigmentosa 2 (X-linked recessive) [Source:HGNC Symbol;Acc:10274] zzz999 23133 PHF8 PHD finger protein 8 [Source:HGNC Symbol;Acc:20672] zzz999 10618 TGOLN2 trans-golgi network protein 2 [Source:HGNC Symbol;Acc:15450] zzz999 221154 EFHA1 EF-hand domain family, member A1 [Source:HGNC Symbol;Acc:31830] zzz999 10728 PTGES3 prostaglandin E synthase 3 (cytosolic) [Source:HGNC Symbol;Acc:16049] zzz999 23075 SWAP70 SWAP switching B-cell complex 70kDa subunit [Source:HGNC Symbol;Acc:17070] zzz999

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.